STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1167Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (1150 aa)    
Predicted Functional Partners:
RSp1168
Probable transmembrane protein.
 
 
   0.901
RSc2460
Putative transmembrane protein.
  
     0.691
RSp1288
Putative type-4 fimbrial biogenesis pily1-related protein.
  
     0.670
RSp0641
Probable non ribosomal peptide synthetase protein.
 
   
 0.615
RSc0772
Putative oxidoreductase dehydrogenase (cytochrome c subunit) signal peptide protein.
  
 
 0.602
RSp0989
Putative cytochrome c, monohaem transmembrane protein.
  
 
 0.602
acpA
Putative acid phosphatase protein.
  
     0.600
RSc0770
Putative transmembrane dehydrogenase (small subunit) oxidoreductase protein.
   
   0.599
RSp1453
Putative cytochrome c signal peptide protein.
   
 
 0.575
RSc3028
Putative signal peptide protein.
  
     0.569
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.