STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1168Probable transmembrane protein. (628 aa)    
Predicted Functional Partners:
coxM
Probable cytochrome c oxidase polypeptide II (cytochrome bb3 subunit 2) transmembrane protein.
  
 
 0.924
RSp1167
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
 
   0.901
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.816
petB
Putative cytochrome b subunit transmembrane protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.806
RSc2460
Putative transmembrane protein.
  
     0.761
RSc1277
Probable cytochrome c oxidase (subunit II) transmembrane protein.
  
 
 0.730
RSp0992
Probable signal peptide protein.
  
 
 0.730
RSp1288
Putative type-4 fimbrial biogenesis pily1-related protein.
  
     0.727
RSc1276
Probable cytochrome c oxidase (subunitI transmembrane protein; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.726
RSp0993
Probable cytochrome c oxidase subunit transmembrane protein.
  
 
 0.726
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.