STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1173Probable cytochrome c peroxidase transmembrane protein. (441 aa)    
Predicted Functional Partners:
acpA
Putative acid phosphatase protein.
 
   
 0.867
pilV
Putative type-4 fimbrial biogenesis pilv transmembrane protein.
  
     0.560
RSp1288
Putative type-4 fimbrial biogenesis pily1-related protein.
  
     0.552
RSc0450
Probable atp-sensitive inward rectifier potassium channel related transmembrane protein.
  
     0.540
pilX
Probable type-4 fimbrial biogenesis transmembrane protein.
  
     0.521
RSp1172
Probable transmembrane protein.
       0.515
RSc1252
Putative nitrous oxide reductase, n-terminal; signal peptide protein.
  
 
 0.513
RSp1168
Probable transmembrane protein.
 
  
 0.502
RSc1651
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.488
RSp0719
Hypothetical signal peptide protein.
 
     0.478
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.