STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acpAPutative acid phosphatase protein. (715 aa)    
Predicted Functional Partners:
RSp1173
Probable cytochrome c peroxidase transmembrane protein.
 
   
 0.867
RSp1288
Putative type-4 fimbrial biogenesis pily1-related protein.
  
   
 0.739
acpP3
Probable acyl carrier protein 3 (acp 3); Carrier of the growing fatty acid chain in fatty acid biosynthesis.; Belongs to the acyl carrier protein (ACP) family.
      
 0.720
RSp1168
Probable transmembrane protein.
  
     0.719
pilX
Probable type-4 fimbrial biogenesis transmembrane protein.
  
     0.701
RSc2493
Putative cytochrome c peroxidase signal peptide protein.
 
     0.692
mntH1
Putative manganese transport transmembrane protein.
  
   
 0.689
RSp1652
Putative metallophosphoesterase/phosphohydrolase protein.
  
     0.681
pilV
Putative type-4 fimbrial biogenesis pilv transmembrane protein.
  
   
 0.672
RSp0718
Putative cytochrome c peroxidase protein.
 
     0.650
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.