STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acpAPutative acid phosphatase protein. (715 aa)    
Predicted Functional Partners:
RSp1173
Probable cytochrome c peroxidase transmembrane protein.
 
     0.862
RSp1288
Putative type-4 fimbrial biogenesis pily1-related protein.
  
     0.733
RSp1168
Probable transmembrane protein.
  
     0.719
pilX
Probable type-4 fimbrial biogenesis transmembrane protein.
  
     0.701
RSc2493
Putative cytochrome c peroxidase signal peptide protein.
 
     0.692
mntH1
Putative manganese transport transmembrane protein.
  
   
 0.689
RSp1652
Putative metallophosphoesterase/phosphohydrolase protein.
  
     0.681
pilV
Putative type-4 fimbrial biogenesis pilv transmembrane protein.
  
     0.664
RSp0718
Putative cytochrome c peroxidase protein.
 
     0.651
RSp1650
Probable cog5662, predicted transmembrane transcriptional regulator (anti-sigma factor) transcription regulator protein.
  
     0.627
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.