STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1180Probable hemagglutinin/hemolysin-related protein. (4106 aa)    
Predicted Functional Partners:
RSp1182
Putative typeIsecretion system, atp-binding transmembrane abc transporter protein.
 
  
 0.897
RSp1183
Probable typeIsecretion system transmembrane protein.
 
  
 0.825
RSp0641
Probable non ribosomal peptide synthetase protein.
  
  
 0.767
RSc0104
Putative hemolysin-type calcium-binding protein.
 
  
 0.742
RSp1181
Probable typeIsecretion system outer membrane efflux transmembrane protein.
 
  
 0.692
RSp0540
Probable hemagglutinin-related protein.
   
  
 0.648
RSp1620
Putative surface-exposed adhesin protein.
      
 0.639
RSp0116
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
 
 0.623
RSp0642
Probable non ribosomal peptide synthetase protein.
     
 0.580
RSp0292
Probable typeIsecretion system, atp-binding transmembrane abc transporter protein.
 
  
 0.575
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.