STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1181Probable typeIsecretion system outer membrane efflux transmembrane protein. (483 aa)    
Predicted Functional Partners:
RSp1182
Putative typeIsecretion system, atp-binding transmembrane abc transporter protein.
  
 0.945
RSp1183
Probable typeIsecretion system transmembrane protein.
 
 0.905
RSp1180
Probable hemagglutinin/hemolysin-related protein.
 
  
 0.686
RSp0291
Probable typeIsecretion system transmembrane protein.
 
 0.560
emrA
Probable multidrug resistance a (translocase) transmembrane protein.
 
 
 0.539
RSc1853
Probable multidrug resistance transmembrane protein.
 
 
 0.538
RSp0440
Putative multidrug resistance homolog transmembrane protein.
 
 
 0.527
RSc2726
Probable multidrug resistance transport transmembrane protein.
 
 
 0.525
acrA
Probable acriflavin resistance lipoprotein a precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.514
RSp1112
Probable transmembrane multidrug efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.500
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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