STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1182Putative typeIsecretion system, atp-binding transmembrane abc transporter protein. (739 aa)    
Predicted Functional Partners:
RSp1183
Probable typeIsecretion system transmembrane protein.
 
 0.985
RSp1181
Probable typeIsecretion system outer membrane efflux transmembrane protein.
  
 0.945
RSp0291
Probable typeIsecretion system transmembrane protein.
 
 0.941
pstB
Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.901
RSp1180
Probable hemagglutinin/hemolysin-related protein.
 
  
 0.893
RSc3408
Probable atp-binding abc transporter protein.
 
     
0.867
RSc2106
Probable amino-acid atp-binding abc transporter protein.
 
     
0.845
RSc2260
Probable amino-acid atp-binding abc transporter protein.
 
     
0.842
RSc0102
Putative calcium binding hemolysin protein.
 
  
 0.766
RSp0257
Putative siderophore-interacting protein.
   
   0.755
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.