STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp1183Probable typeIsecretion system transmembrane protein. (358 aa)    
Predicted Functional Partners:
RSp1182
Putative typeIsecretion system, atp-binding transmembrane abc transporter protein.
 
 0.984
RSp1181
Probable typeIsecretion system outer membrane efflux transmembrane protein.
 
 
 0.904
RSp0292
Probable typeIsecretion system, atp-binding transmembrane abc transporter protein.
 
 0.902
RSp1180
Probable hemagglutinin/hemolysin-related protein.
 
  
 0.825
RSc0246
Putative calcium binding hemolysin protein.
 
  
 0.715
RSc0102
Putative calcium binding hemolysin protein.
 
  
 0.714
RSc0249
Putative calcium binding hemolysin protein.
 
  
 0.682
RSp0294
Putative hemolysin-type calcium-binding protein.
 
  
 0.619
RSp0295
Putative hemolysin-type protein.
 
  
 0.607
RSc0104
Putative hemolysin-type calcium-binding protein.
 
   
 0.586
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.