STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1186Probable transcription regulator protein. (289 aa)    
Predicted Functional Partners:
ndeD
Probable n-acyl-d-glutamate deacylase protein.
 
     0.896
dsd
Probable d-serine deaminase (d-serine dehydratase) protein.
 
     0.843
glk
Probable glucokinase (glucose kinase) protein; Belongs to the bacterial glucokinase family.
   
 0.801
RSp1188
Miscellaneous; hypothetical/partial homology.
 
     0.790
eda
Probable bifunctional alkh protein (khg/kdpg aldolase): 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxyphosphogluconate aldolase.
 
   
 0.677
RSp1184
Putative fructokinase-like protein (sugar kinase).
 
   
 0.629
scrA
Probable pts system, sucrose-specific (IIbc component) transmembrane protein.
  
  
 0.548
edd
Probable phosphogluconate dehydratase oxidoreductase protein; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
   
 0.488
gntP
Probable high-affinity gluconate transporter (gnt-III system) transmembrane protein.
       0.471
RSc1249
Probable transcription regulator protein.
  
     0.468
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.