STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndeDProbable n-acyl-d-glutamate deacylase protein. (494 aa)    
Predicted Functional Partners:
RSp1188
Miscellaneous; hypothetical/partial homology.
     0.945
dsd
Probable d-serine deaminase (d-serine dehydratase) protein.
 
   
 0.910
RSp1186
Probable transcription regulator protein.
 
     0.896
RSp1184
Putative fructokinase-like protein (sugar kinase).
     0.768
RSp1459
Putative predicted metal-dependent hydrolase with the tim-barrel fold signal peptide protein.
 
     0.731
gntP
Probable high-affinity gluconate transporter (gnt-III system) transmembrane protein.
 
     0.625
eda
Probable bifunctional alkh protein (khg/kdpg aldolase): 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxyphosphogluconate aldolase.
       0.450
RSc2709
Putative ipr001608 alanine racemase, n-terminal protein.
 
   
 0.429
RSp1573
Hypothetical mlrc, c-terminal harboring protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.410
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.