STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp1195Probable two component transmembrane sensor kinase transcription regulator protein. (431 aa)    
Predicted Functional Partners:
RSp1196
Probable two component response regulator transcription regulator protein.
 0.997
risA
Two-component system, OmpR family, phosphate regulon response regulator OmpR; Probable oxidative stress resistance two-component response regulator transcription regulator protein.
 0.985
risS
Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ; Probable oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein.
  
  
 
0.927
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.846
RSp1194
Putative transmembrane protein.
      0.830
phoB
Probable phosphate regulon two-component response regulator transcription regulator protein.
 
 
 0.813
RSc3392
Probable response regulator transcription regulator protein.
 
 
 0.804
RSc3064
Probable response regulator transcription regulator protein.
 
 
 0.791
RSp0917
Probable two component response regulator transcription regulator protein.
 
 
 0.789
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
 
 
 0.787
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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