STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1195Probable two component transmembrane sensor kinase transcription regulator protein. (431 aa)    
Predicted Functional Partners:
RSp1196
Probable two component response regulator transcription regulator protein.
 0.997
risA
Two-component system, OmpR family, phosphate regulon response regulator OmpR; Probable oxidative stress resistance two-component response regulator transcription regulator protein.
 0.984
risS
Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ; Probable oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein.
  
  
 
0.927
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
    
 0.840
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.836
RSp1194
Putative transmembrane protein.
      0.831
phoB
Probable phosphate regulon two-component response regulator transcription regulator protein.
 
 0.810
RSc3392
Probable response regulator transcription regulator protein.
 
 
 0.800
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
 
 
 0.788
RSc3064
Probable response regulator transcription regulator protein.
 
 0.787
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.