STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clsProbable cardiolipin synthetase transmembrane protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. (489 aa)    
Predicted Functional Partners:
clsB
Putative phospholipase d/transphosphatidylase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
  
 
0.927
plcN
Probable non-hemolytic phospholipase c (phosphatidylcholine cholinephosphohydrolase) signal peptide protein.
     
 0.912
pgpA
Probable phosphatidyl-glycerophosphatase hydrolase transmembrane protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
 0.909
pglA
Polygalacturonase precursor (pga) (pectinase). signal peptide protein; Contributes to the wilt disease production on tomato; Belongs to the glycosyl hydrolase 28 family.
   
  
 0.571
iscU
Probable iron-binding protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
 
 0.542
RSp1210
Probable lipoprotein transmembrane.
       0.479
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.470
lrgB
Putative effector of murein hydrolase transmembrane protein.
 
   
 0.464
RSp1522
Probable transmembrane protein.
  
  
 0.459
lrgA
Putative effector of murein hydrolase transmembrane protein.
 
   
 0.447
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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