STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
RSp1220Probable flavoprotein fad oxidoreductase. (409 aa)    
Predicted Functional Partners:
nasA
Probable nitrate reductase large subunit oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.999
nirD
Probable nitrite reductase nadph (small subunit) oxidoreductase protein.
 
 0.999
RSp1223
Probable high affinity nitrate transporter transmembrane protein.
 
 0.994
nirB
Probable nitrite reductase nadph (large subunit) oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 
0.977
narG
Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.973
narH
Probable respiratory nitrate reductase oxidoreductase protein.
  
 
 0.943
narK1
Putative nitrite/nitrate transporter transmembrane protein.
 
 
 0.942
narI
Probable respiratory nitrate reductase transmembrane protein.
  
 
 0.931
narK2
Probable nitrite/nitrate transporter transmembrane protein.
  
 
 0.924
gdhA
Probable glutamate dehydrogenase (nad(p)+) oxidoreductase protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.917
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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