STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RSp1245Putative arylesterase protein. (213 aa)    
Predicted Functional Partners:
RSp1244
Putative ketopantoate reductase oxidoreductase protein; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.538
cbhA
Probable exoglucanase a (1,4-beta-cellobiosidase) protein; Belongs to the glycosyl hydrolase family 6.
  
 
 0.506
egl
Endoglucanase precursor (endo-1,4-beta-glucanase)(cellulase) protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.495
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.492
RSp1247
Probable transcription regulator protein.
  
    0.459
RSp1248
Putative dienelactone hydrolase oxidoreductase protein.
     
 0.453
RSc1718
Probable atp-binding abc transporter protein.
   
   0.445
RSc2091
Probable cog3127, predicted abc-type transport system involved in lysophospholipase l1 biosynthesis, permease component abc transporter protein.
   
   0.445
RSp1246
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.430
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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