STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilE1Probable type 4 fimbrial biogenesis signal peptide protein. (155 aa)    
Predicted Functional Partners:
pilV
Putative type-4 fimbrial biogenesis pilv transmembrane protein.
 
  
 0.959
RSp1292
Putative type-4 fimbrial pilin related signal peptide protein.
 
  
 0.956
pilW
Putative type 4 fimbrial biogenesis transmembrane protein.
 
  
 0.955
RSp1288
Putative type-4 fimbrial biogenesis pily1-related protein.
 
  
 0.953
pilX
Probable type-4 fimbrial biogenesis transmembrane protein.
 
  
 0.942
pilP
Probable fimbrial type-4 assembly lipoprotein.
  
  
 0.861
RSc0726
Probable type 4 fimbrial biogenesis pilw related protein transmembrane.
 
  
 0.845
pilN
Probable fimbrial type-4 assembly membrane transmembrane protein.
 
  
 0.844
pilO
Probable fimbrial type-4 assembly membrane transmembrane protein.
 
  
 0.841
pilM
Probable fimbrial type-4 assembly protein.
 
   
 0.816
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.