STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilE1Probable type 4 fimbrial biogenesis signal peptide protein. (155 aa)    
Predicted Functional Partners:
pilV
Putative type-4 fimbrial biogenesis pilv transmembrane protein.
 
  
 0.965
pilW
Putative type 4 fimbrial biogenesis transmembrane protein.
 
  
 0.960
RSp1292
Putative type-4 fimbrial pilin related signal peptide protein.
 
  
 0.956
pilX
Probable type-4 fimbrial biogenesis transmembrane protein.
 
  
 0.951
RSp1288
Putative type-4 fimbrial biogenesis pily1-related protein.
 
  
 0.950
RSc0726
Probable type 4 fimbrial biogenesis pilw related protein transmembrane.
 
  
 0.837
pilN
Probable fimbrial type-4 assembly membrane transmembrane protein.
 
  
 0.815
RSc0724
Putative type-4 fimbrial biogenesis pily1-related signal peptide protein.
 
  
 0.795
RSc0722
Putative type 4 fimbrial pilin related transmembrane protein.
 
  
 0.791
pilO
Probable fimbrial type-4 assembly membrane transmembrane protein.
 
   
 0.789
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.