STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tISRso17-5Isrso17-transposase protein. (453 aa)    
Predicted Functional Partners:
RSc2599
Miscellaneous; hypothetical/partial homology.
  
    0.621
tISRso1-7
Isrso1-transposase protein.
       0.615
RSc0170
Probable transmembrane protein.
  
     0.569
RSc3030
Hypothetical precursor. signal peptide protein; Protects the bacterial cell from host peptidases.
  
     0.525
iolB
Putative myo-inositol catabolism protein.
   
    0.495
tISRso12
Probable transposase protein.
       0.464
RSc1482
Hypothetical protein of unknown function duf1653.
  
     0.447
tISRso13-6
Isrso13-transposase protein.
       0.445
RSp0559.5
Putative transposase remnant protein.
  
     0.440
RSp1170
Putative signal peptide protein.
  
     0.433
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.