STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tISRso17-6Isrso17-transposase protein. (453 aa)    
Predicted Functional Partners:
RSc2599
Miscellaneous; hypothetical/partial homology.
  
    0.621
tISRso1-8
Isrso1-transposase protein.
       0.615
RSc0170
Probable transmembrane protein.
  
     0.569
RSc3030
Hypothetical precursor. signal peptide protein; Protects the bacterial cell from host peptidases.
  
     0.525
iolB
Putative myo-inositol catabolism protein.
   
    0.495
RSp1333
Probable transposase protein.
       0.464
RSc1482
Hypothetical protein of unknown function duf1653.
  
     0.447
RSp0559.5
Putative transposase remnant protein.
  
     0.440
RSp1170
Putative signal peptide protein.
  
     0.433
phcS
Transmembrane sensor histidine kinase transcription regulator protein.
  
     0.409
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.