STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1365Putative phospholipid/glycerol acyltransferase; transmembrane protein. (300 aa)    
Predicted Functional Partners:
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.551
abpE
Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
       0.512
RSp1367
Putative cytochrome c5 protein.
       0.512
RSc1806
Probable polyketide synthase protein.
  
 
 0.487
RSp0194
Putative 3-oxoacyl-[acyl-carrier-protein].
 
  
 0.478
RSc0788
Probable transmembrane protein.
  
     0.428
RSc1810
Probable polyketide synthase protein.
  
 
 0.425
pyrD
Probable dihydroorotate dehydrogenase oxidoreductase protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
    0.419
RSc1297
Probable pseudogene (sterol desaturase fragment) transmembrane protein.
  
   
 0.415
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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