abpE protein (Ralstonia solanacearum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

abpE

Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. (340 aa)

Predicted Functional Partners:

nosR

0.826

RSp1367

0.773

nosZ

0.689

nosD

0.594

nosY

0.594

nosL

0.568

nosF

0.529

RSp1365

0.512

Your Current Organism:

Ralstonia solanacearum

NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RSp1365	RSp1367	RSp1365	RSp1367	Putative phospholipid/glycerol acyltransferase; transmembrane protein.	Putative cytochrome c5 protein.	0.512
RSp1365	abpE	RSp1365	RSp1366	Putative phospholipid/glycerol acyltransferase; transmembrane protein.	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	0.512
RSp1367	RSp1365	RSp1367	RSp1365	Putative cytochrome c5 protein.	Putative phospholipid/glycerol acyltransferase; transmembrane protein.	0.512
RSp1367	abpE	RSp1367	RSp1366	Putative cytochrome c5 protein.	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	0.773
RSp1367	nosD	RSp1367	RSp1370	Putative cytochrome c5 protein.	Probable periplasmic copper-binding nosd signal peptide protein.	0.534
RSp1367	nosF	RSp1367	RSp1371	Putative cytochrome c5 protein.	Probable abc-type copper transport system, atpase component abc transporter protein.	0.477
RSp1367	nosL	RSp1367	RSp1373	Putative cytochrome c5 protein.	Probable nosl lipoprotein.	0.536
RSp1367	nosR	RSp1367	RSp1369	Putative cytochrome c5 protein.	Probable transmembrane regulatory nosr transcription regulator protein.	0.664
RSp1367	nosY	RSp1367	RSp1372	Putative cytochrome c5 protein.	Probable nosy transmembrane protein.	0.530
RSp1367	nosZ	RSp1367	RSp1368	Putative cytochrome c5 protein.	Probable nitrous-oxide reductase precursor (n(2)or) (n2oreductase). oxidoreductase protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family.	0.583
abpE	RSp1365	RSp1366	RSp1365	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	Putative phospholipid/glycerol acyltransferase; transmembrane protein.	0.512
abpE	RSp1367	RSp1366	RSp1367	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	Putative cytochrome c5 protein.	0.773
abpE	nosD	RSp1366	RSp1370	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	Probable periplasmic copper-binding nosd signal peptide protein.	0.594
abpE	nosF	RSp1366	RSp1371	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	Probable abc-type copper transport system, atpase component abc transporter protein.	0.529
abpE	nosL	RSp1366	RSp1373	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	Probable nosl lipoprotein.	0.568
abpE	nosR	RSp1366	RSp1369	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	Probable transmembrane regulatory nosr transcription regulator protein.	0.826
abpE	nosY	RSp1366	RSp1372	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	Probable nosy transmembrane protein.	0.594
abpE	nosZ	RSp1366	RSp1368	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	Probable nitrous-oxide reductase precursor (n(2)or) (n2oreductase). oxidoreductase protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family.	0.689
nosD	RSp1367	RSp1370	RSp1367	Probable periplasmic copper-binding nosd signal peptide protein.	Putative cytochrome c5 protein.	0.534
nosD	abpE	RSp1370	RSp1366	Probable periplasmic copper-binding nosd signal peptide protein.	Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.	0.594

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Textmining

Co-occurrence

Databases

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About