STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosFProbable abc-type copper transport system, atpase component abc transporter protein. (314 aa)    
Predicted Functional Partners:
nosY
Probable nosy transmembrane protein.
 
 0.989
nosD
Probable periplasmic copper-binding nosd signal peptide protein.
 
 0.976
nosR
Probable transmembrane regulatory nosr transcription regulator protein.
 
  
 0.975
nosL
Probable nosl lipoprotein.
 
 
 0.971
nosZ
Probable nitrous-oxide reductase precursor (n(2)or) (n2oreductase). oxidoreductase protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family.
 
 
 0.948
RSc0165
Probable abc-type multidrug transport system, permease component abc transporter protein.
 
  
 0.945
livG
Probable amino-acid atp-binding abc transporter protein.
    
0.909
RSc2939
Probable atp-binding abc transporter protein.
 
    
0.742
RSc3372
Probable composite atp-binding transmembrane abc transporter protein.
 
   
0.700
RSc1199
Putative aaa atpase protein.
 
    
0.683
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.