STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosLProbable nosl lipoprotein. (176 aa)    
Predicted Functional Partners:
nosD
Probable periplasmic copper-binding nosd signal peptide protein.
 
  
 0.991
nosY
Probable nosy transmembrane protein.
 
  
 0.990
nosR
Probable transmembrane regulatory nosr transcription regulator protein.
 
  
 0.985
nosZ
Probable nitrous-oxide reductase precursor (n(2)or) (n2oreductase). oxidoreductase protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family.
 
  
 0.960
nosF
Probable abc-type copper transport system, atpase component abc transporter protein.
 
  
 0.960
RSp0969
Putative peptidase u32; protein.
  
    0.656
abpE
Probable thiamine biosynthesis apbe transmembrane protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
   
 0.568
RSc3399
Probable transmembrane protein.
 
     0.566
RSp0970
Probable peptidase u32; protein.
  
    0.545
RSp1367
Putative cytochrome c5 protein.
 
     0.536
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.