STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fliARNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (253 aa)    
Predicted Functional Partners:
flgM
Probable negative regulator of flagellin synthesis (anti-sigma-28 factor) protein.
  
 0.998
flgK
Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
 
  
 0.984
flgD
Probable basal-body rod modification protein flgd; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.979
flgC
Probable flagellar basal-body rod protein flgc; Belongs to the flagella basal body rod proteins family.
 
 
 0.978
flhA
Probable flagellar biosynthesis flha transmembrane protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.978
flgB
Probable flagellar basal-body rod protein flgb; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.976
flgE
Probable flagellar hook protein flge.
 
  
 0.975
flgA
Putative flagella basal body p-ring formation protein.
 
  
 0.974
fliM
Probable flagellar motor switch protein flim.
 
 
 0.972
flgG
Probable flagellar basal-body rod protein flgg (distal rod protein).
 
  
 0.968
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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