STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliARNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (253 aa)    
Predicted Functional Partners:
flgM
Probable negative regulator of flagellin synthesis (anti-sigma-28 factor) protein.
  
 0.998
flgK
Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
 
  
 0.984
flgC
Probable flagellar basal-body rod protein flgc; Belongs to the flagella basal body rod proteins family.
 
 
 0.982
flgD
Probable basal-body rod modification protein flgd; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.980
flgB
Probable flagellar basal-body rod protein flgb; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.978
fliM
Probable flagellar motor switch protein flim.
 
 
 0.978
flhA
Probable flagellar biosynthesis flha transmembrane protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.977
flgE
Probable flagellar hook protein flge.
 
  
 0.976
flgF
Probable flagellar basal-body rod protein flgf; Belongs to the flagella basal body rod proteins family.
 
  
 0.969
flgL
Probable flagellar hook-associated protein 3.
 
  
 0.966
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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