STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
motAProbable chemotaxis (motility protein a) transmembrane. (286 aa)    
Predicted Functional Partners:
motB
Probable chemotaxis (motility protein b) transmembrane.
 0.999
flgH
Probable flagellar l-ring protein precursor (basal body l-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.981
fliF
Probable flagellar m-ring transmembrane protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.980
cheA
Probable chemotaxis sensor histidine kinase transcription regulator protein.
 
  
 0.979
RSp1482
Putative outer membrane transmembrane protein.
  
 
 0.972
flgC
Probable flagellar basal-body rod protein flgc; Belongs to the flagella basal body rod proteins family.
 
  
 0.970
flgJ
Probable flagellar protein flgj.
 
  
 0.968
fliG
Probable flagellar motor switch protein flig.
 
  
 0.967
flhC
Probable flagellar transcriptional activator transcription regulator protein; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.
    0.966
flgD
Probable basal-body rod modification protein flgd; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.965
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.