STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1417Probable transmembrane efflux transmembrane protein; Belongs to the major facilitator superfamily. (467 aa)    
Predicted Functional Partners:
RSc2499
Putative multidrug resistance protein.
  
     0.770
RSp0441
Probable inner membrane multidrug resistance transmembrane protein.
  
     0.723
RSc2726
Probable multidrug resistance transport transmembrane protein.
 
 
 0.715
RSp0440
Putative multidrug resistance homolog transmembrane protein.
 
 
 0.701
RSp1422
Putative peptide synthetase protein.
 
  
 0.701
emrA
Probable multidrug resistance a (translocase) transmembrane protein.
 
 
 0.673
RSc1853
Probable multidrug resistance transmembrane protein.
 
 
 0.660
RSp1419
Putative peptide synthase protein.
 
  
 0.629
RSp1418
Probable hydrolase protein.
       0.566
ppiB
Probable peptidyl-prolyl cis-trans isomerase b (ppiase b) (rotamase b)(cypb protein); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  
 0.560
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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