STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1423Putative dehydrogenase (flavoprotein) oxidoreductase. (435 aa)    
Predicted Functional Partners:
RSp1422
Putative peptide synthetase protein.
       0.773
RSp1424
Probable aminobutyrate--pyruvate aminotransferase protein; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.773
etf
Probable electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.641
etfB
Probable electron transfer flavoprotein (beta-subunit).
  
 
 0.611
eftB
Putative electron transfer flavoprotein beta-subunit.
  
 
 0.611
RSp0625
Probable magnesium chelatase (subunits dI protein.
  
  
 0.599
RSp1425
Probable oxidoreductase oxidoreductase protein.
       0.543
RSc0432
Putative amp-dependent synthetase or ligase protein.
 
   
 0.520
RSc0431
Probable cog4261 : predicted acyltransferase protein.
 
     0.516
RSp1428
Probable thiosulfate sulfurtransferase; protein.
 
     0.515
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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