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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1424Probable aminobutyrate--pyruvate aminotransferase protein; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (434 aa)    
Predicted Functional Partners:
RSc1327
Probable homoserine dehydrogenase oxidoreductase protein.
  
  
 0.926
asd
Probable aspartate-semialdehyde dehydrogenase oxidoreductase protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
    
 0.916
RSp1422
Putative peptide synthetase protein.
  
  
 0.906
RSp1423
Putative dehydrogenase (flavoprotein) oxidoreductase.
       0.773
RSp1425
Probable oxidoreductase oxidoreductase protein.
 
  
 0.741
RSp0641
Probable non ribosomal peptide synthetase protein.
  
  
0.607
RSc1806
Probable polyketide synthase protein.
  
 
 0.554
RSc1810
Probable polyketide synthase protein.
  
 
 0.521
RSp1431
Putative glycine/d-amino acid oxidases (deaminating) oxidoreductase protein.
  
  
 0.510
iucD
Probable l-lysine 6-monooxygenase (lysine n(6)-hydroxylase) oxidoreductase protein.
 
  
 0.503
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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