STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
RSp1424Probable aminobutyrate--pyruvate aminotransferase protein; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (434 aa)    
Predicted Functional Partners:
RSc1327
Probable homoserine dehydrogenase oxidoreductase protein.
  
  
 0.925
RSp1422
Putative peptide synthetase protein.
  
  
 0.919
asd
Probable aspartate-semialdehyde dehydrogenase oxidoreductase protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
    
 0.918
RSp1423
Putative dehydrogenase (flavoprotein) oxidoreductase.
     
 0.779
RSp1425
Probable oxidoreductase oxidoreductase protein.
 
  
 0.761
RSp0641
Probable non ribosomal peptide synthetase protein.
  
  
 0.662
RSc1806
Probable polyketide synthase protein.
  
 
 0.585
iucD
Probable l-lysine 6-monooxygenase (lysine n(6)-hydroxylase) oxidoreductase protein.
 
  
 0.543
RSp1431
Putative glycine/d-amino acid oxidases (deaminating) oxidoreductase protein.
  
  
 0.505
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
  
  
 0.489
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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