STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RSp1447Probable abc-type branched-chain amino acid transport systems, periplasmic component abc transporter protein. (386 aa)    
Predicted Functional Partners:
RSp0706
Probable amino-acid composite atp-binding transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.804
RSc2439
Probable amino-acid transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.745
RSp0015
Probable amino-acid transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.672
livM
Probable amino acid transport system permease lipoprotein transmembrane; Belongs to the binding-protein-dependent transport system permease family.
 
    0.650
RSp0705
Probable amino-acid transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.649
livH1
Putative amino acid transmembrane transmembrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.639
livH2
Putative amino-acid transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.623
RSc2438
Probable amino acid atp-binding abc transporter protein.
 
  
 0.614
RSc2247
Probable transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.604
RSc2248
Probable transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.580
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.