STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1465Probable abc-type transport system, permease component abc transporter protein. (420 aa)    
Predicted Functional Partners:
RSp1464
Probable abc-type transport system, atpase component abc transporter protein.
 
 0.998
lolD
Probable lipoprotein-releasing system atp-binding lold. abc transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.989
RSp1463
Putative abc transporter related protein.
 
  
 0.964
RSc1718
Probable atp-binding abc transporter protein.
     0.943
RSp0479
Probable atp-binding abc transporter protein.
 
      0.899
RSp0932
Probable amino-acid atp-binding abc transporter protein.
 
      0.899
RSc2106
Probable amino-acid atp-binding abc transporter protein.
 
      0.898
RSc2260
Probable amino-acid atp-binding abc transporter protein.
 
      0.898
gltL
Putative glutamate/aspartate transport atp-binding abc transporter protein.
 
      0.897
RSc3408
Probable atp-binding abc transporter protein.
 
      0.897
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.