STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp1476Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (141 aa)    
Predicted Functional Partners:
RSp0610
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
      0.700
RSp1650
Probable cog5662, predicted transmembrane transcriptional regulator (anti-sigma factor) transcription regulator protein.
  
     0.586
RSp0597
Putative 3-demethylubiquinone-9 3-methyltransferase; protein.
 
     0.578
RSp1477
Probable signal peptide protein.
       0.543
RSp0181
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.519
RSp1214
Probable cog3644, uncharacterized protein conserved in bacteria.
  
     0.486
RSp0637
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.448
RSp1652
Putative metallophosphoesterase/phosphohydrolase protein.
  
     0.428
RSc2567
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.424
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.