STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1482Putative outer membrane transmembrane protein. (215 aa)    
Predicted Functional Partners:
RSp1481
Probable transmembrane protein.
     0.991
motA
Probable chemotaxis (motility protein a) transmembrane.
  
 
 0.936
RSp1483
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
      0.931
RSp1480
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
      0.929
RSp0598
Putative response regulator transcription regulator protein.
  
  
 0.884
flgC
Probable flagellar basal-body rod protein flgc; Belongs to the flagella basal body rod proteins family.
 
  
 0.821
fliL
Probable flagellar flil transmembrane protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.803
fliA
RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
  
 0.802
flgK
Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
  
  
 0.787
fliD
Probable flagellar hook-associated protein 2 (filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.784
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.