STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1484Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily) oxidoreductase protein. (246 aa)    
Predicted Functional Partners:
RSp1029
Putative transmembrane acyl-coa desaturase (fatty acid desaturase) oxidoreductase protein.
  
   
 0.719
RSp1485
Probable transmembrane protein.
       0.718
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.671
RSp1486
Putative biotin carboxylase protein.
 
     0.643
tzs
Isopentenyl transferase protein; Transfers dimethylallyl groups to AMP as part of the biosynthesis of cytokinin phytohormones; Belongs to the isopentenyl transferase family.
  
   
 0.614
RSp1137
Putative rhs-related transmembrane protein.
  
     0.607
RSc3426
Probable transmembrane protein.
  
     0.551
cmcH
Probable 3'-hydroxymethylcephem-o-carbamoyltransferase protein.
       0.544
RSc2263
Probable lipoprotein.
  
     0.505
RSp1283
Putative lamb type porin transmembrane protein.
  
     0.497
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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