STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1501Probable signal peptide protein. (194 aa)    
Predicted Functional Partners:
RSp1502
Probable signal peptide protein.
   
 0.994
RSp1503
Probable major anaerobically induced outer membrane transmembrane protein; Belongs to the multicopper oxidase family.
 
  
 0.925
norB
Probable nitric oxide reductase (subunit b) transmembrane protein.
 
   
 0.760
coxM
Probable cytochrome c oxidase polypeptide II (cytochrome bb3 subunit 2) transmembrane protein.
 
 0.703
RSc2784
Putative ipr012335 thioredoxin fold transmembrane protein.
 
 
 0.628
RSc0333
Putative thiol-disulfide isomerase or thioredoxin transmembrane protein.
 
 
 0.612
RSc3254
Putative thioredoxin fold harboring signal peptide protein.
 
 
 0.602
RSp1504
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.537
ctaG
Probable cytochrome c oxidase assembly transmembrane protein.
  
 
 0.530
RSp1653
Putative cytochrome c oxidase subunit II oxidoreductase protein.
 
 
 0.523
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.