STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1503Probable major anaerobically induced outer membrane transmembrane protein; Belongs to the multicopper oxidase family. (510 aa)    
Predicted Functional Partners:
norB
Probable nitric oxide reductase (subunit b) transmembrane protein.
 
 0.998
narG
Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.986
narH
Probable respiratory nitrate reductase oxidoreductase protein.
  
 0.971
coxM
Probable cytochrome c oxidase polypeptide II (cytochrome bb3 subunit 2) transmembrane protein.
  
 
 0.948
nasA
Probable nitrate reductase large subunit oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.947
RSp1502
Probable signal peptide protein.
 
     0.944
RSp1501
Probable signal peptide protein.
 
  
 0.925
narI
Probable respiratory nitrate reductase transmembrane protein.
  
 
 0.920
narK1
Putative nitrite/nitrate transporter transmembrane protein.
    
 0.918
narK2
Probable nitrite/nitrate transporter transmembrane protein.
    
 0.918
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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