STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1507Probable atp-binding abc transporter protein. (261 aa)    
Predicted Functional Partners:
RSp1508
Probable transmembranee abc transporter protein.
  
 0.980
nasF
Putative nitrate transporter protein.
  
 0.951
RSp1509
Putative periplasmic substrate-binding transmembrane protein.
 
  
 0.937
ssuC
Putative aliphatic sulfonates transmembrane abc transporter protein.
  
 0.899
dppD2
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
     
0.899
dppD1
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
     
0.899
nasE
Putative nitrate transmembrane abc transporter protein.
  
 0.881
RSc1200
Probable cog0600, abc-type nitrate/sulfonate/bicarbonate transport system, permease component abc transporter protein.
  
 0.867
RSc1198
Putative abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component abc transporter protein.
 
  
 0.771
ssuA2
Putative alkanesulfonates binding protein precursor.
  
 0.726
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.