Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSp1509Putative periplasmic substrate-binding transmembrane protein. (346 aa)    
Predicted Functional Partners:
RSp1508
Probable transmembranee abc transporter protein.
 
 0.994
RSp1507
Probable atp-binding abc transporter protein.
 
 0.989
RSc1198
Putative abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component abc transporter protein.
  
 
  0.954
RSc3391
NitT/TauT family transport system substrate-binding protein; Probable cog0715, abc-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component abc transporter protein.
  
  
  0.954
RSc1200
Probable cog0600, abc-type nitrate/sulfonate/bicarbonate transport system, permease component abc transporter protein.
 
 0.944
RSc1199
Putative aaa atpase protein.
 
 0.932
ssuC
Putative aliphatic sulfonates transmembrane abc transporter protein.
 
 0.931
ssuA2
Putative alkanesulfonates binding protein precursor.
  
 
  0.928
ssuB
Putative aliphatic sulfonates atp-binding abc transporter protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.925
ssuA1
Putative alkanesulfonates binding precursor signal peptide protein.
  
 
  0.924
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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