STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp1519Putative sulfate transporter transmembrane protein. (567 aa)    
Predicted Functional Partners:
RSc1810
Probable polyketide synthase protein.
    
 
 0.744
RSp1469
Probable tyrosine phosphatase protein.
   
 
 0.734
petB
Putative cytochrome b subunit transmembrane protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.679
tek2
Probable tek-related protein.
    
   0.547
tek
Tek signal peptide protein.
    
   0.547
nuoM
Probable transmembrane nadh dehydrogenaseI(chain m) oxidoreductase protein.
  
 
 0.546
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.526
RSp1518
Probable signal peptide protein.
       0.516
RSp0512
Probable papd-like; transmembrane protein.
  
     0.514
RSc0771
Putative transmembrane dehydrogenase (large subunit) oxidoreductase protein.
  
     0.477
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.