Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp1521Putative type iv secretory pathway virj component-related protein. (604 aa)    
Predicted Functional Partners:
RSp1522
Probable transmembrane protein.
 
  
 0.978
RSc1651
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
      
 0.821
RSp1575
Probable amino-acid-binding periplasmic (pbp) abc transporter protein.
  
   
 0.708
RSc2574
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
      
 0.637
RSp0179
Putative conjugal transfert trbi-related protein.
      
 0.637
traG
Probable plasmid conjugation trag transmembrane protein.
      
 0.547
traR
Probable plasmid replication regulatory trar transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
      
 0.546
RSp1520
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.510
cmtD
Probable hcomoda decarboxylase protein.
  
     0.490
trbG
Probable conjugal transfer lipoprotein trbg.
      
 0.462
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.