STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efe2-oxoglutarate-dependent ethylene/succinate-forming enzyme (ethylene-forming enzyme) (efe) protein; Simultaneously catalyzes two reactions, namely formation of ethylene and of succinate from 2-oxoglutarate. (345 aa)    
Predicted Functional Partners:
acdS
Probable 1-aminocyclopropane-1-carboxylate deaminase (accdeaminase) (accd) protein; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.
  
   
 0.598
RSc1810
Probable polyketide synthase protein.
  
 
 
 0.557
RSp1229
Probable alpha/beta hydrolase; protein.
  
   
 0.530
RSc1806
Probable polyketide synthase protein.
  
 
 
 0.519
RSc0818
Putative endoglucanase c-terminal domain harboring protein.
  
     0.512
RSc2596
Putative amidase related to nicotinamidase; protein.
  
     0.476
tzs
Isopentenyl transferase protein; Transfers dimethylallyl groups to AMP as part of the biosynthesis of cytokinin phytohormones; Belongs to the isopentenyl transferase family.
      
 0.456
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.448
RSp0438
Probable hydrolase protein.
  
     0.438
RSc0582
Probable avrd-related protein.
      
 0.437
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.