STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
hexRPutative transcription regulation repressor hexr transcription regulator protein. (277 aa)    
Predicted Functional Partners:
glk
Probable glucokinase (glucose kinase) protein; Belongs to the bacterial glucokinase family.
  
 0.951
eda
Probable bifunctional alkh protein (khg/kdpg aldolase): 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxyphosphogluconate aldolase.
 
   
 0.786
scrA
Probable pts system, sucrose-specific (IIbc component) transmembrane protein.
 
  
 0.643
edd
Probable phosphogluconate dehydratase oxidoreductase protein; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
   
 0.636
nrdR
Putative transcriptional regulator protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
   
  
 0.580
fis
Putative fis-like dna-binding. transcription regulator protein; Belongs to the transcriptional regulatory Fis family.
      
 0.572
RSc1249
Probable transcription regulator protein.
  
     0.484
dld
Putative d-lactate dehydrogenase (cytochrome) oxidoreductase protein.
     
 0.461
RSc1378
Probable l-asparaginase precursor protein.
  
    0.452
lldP
Putative l-lactate permease transmembrane protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
      
 0.438
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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