STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1572Putative transport transmembrane protein. (433 aa)    
Predicted Functional Partners:
RSp1573
Hypothetical mlrc, c-terminal harboring protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
       0.773
exuT1
Probable hexuronate transporter transmembrane protein.
  
     0.684
RSp1396
Putative transporter transmembrane protein.
  
     0.651
RSp0234
Probable metabolite transport transmembrane protein.
  
     0.454
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.429
RSp1571
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
    0.414
RSp1422
Putative peptide synthetase protein.
     
 0.405
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.