STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1595Probable metabolite transport transmembrane protein. (424 aa)    
Predicted Functional Partners:
RSp1596
Hypothetical protein; Miscellaneous; unknown.
       0.773
RSc2112
Probable metabolite transport transmembrane protein.
  
   
 0.731
gudP
Putative glucarate transporter (d-glucarate permease) transmembrane protein.
  
     0.647
RSp1594
Probable porin signal peptide protein.
 
     0.623
exuT2
Putative hexuronate transporter transmembrane protein.
  
     0.455
RSc2352
Probable permease transmembrane protein.
  
     0.435
exuT1
Probable hexuronate transporter transmembrane protein.
  
     0.419
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.