STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1597Probable transport transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1064 aa)    
Predicted Functional Partners:
RSp1598
Putative transport transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.989
RSp1599
Putative outer membrane drug efflux lipoprotein.
   0.874
RSp1197
Putative membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.802
RSp1041
Probable cation transporter transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.773
RSp0529
Putative cation efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.683
RSp1457
Putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.524
RSc1653
Putative transport/efflux transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.514
czcB
Probable cobalt-zinc-cadmium resistance (cation efflux system protein) transmembrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.514
RSc1195
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.498
RSp1112
Probable transmembrane multidrug efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.404
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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