STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaAPutative altronate hydrolase (altronic acid hydratase) protein. (519 aa)    
Predicted Functional Partners:
RSp1184
Putative fructokinase-like protein (sugar kinase).
 
  
 0.852
hpaI2
Probable 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase protein; Belongs to the HpcH/HpaI aldolase family.
    0.806
rpe
Probable ribulose-phosphate 3-epimerase protein; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.801
rpiA
Probable ribose-5-phosphate isomerase a (phosphoriboisomerase a)(pri) protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
RSp1614
Probable transport transmembrane protein.
  
 0.797
nusG
Probable transcription antitermination protein; Participates in transcription elongation, termination and antitermination.
      
 0.738
dalD
Putative d-arabinitol 4-dehydrogenase. oxidoreductase protein; Belongs to the mannitol dehydrogenase family.
  
 0.722
dgoAa
Putative 2-dehydro-3-deoxyphosphogalactonate aldolase protein.
 
  
 0.622
RSp1616
Probable transcription regulator transcription regulator protein.
 
     0.599
pehB
Exo-poly-galacturonosidase signal peptide protein; Belongs to the glycosyl hydrolase 28 family.
 
     0.597
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.