STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1616Probable transcription regulator transcription regulator protein. (350 aa)    
Predicted Functional Partners:
fruB
Probable multiphosphoryl transfer protein mtp.
 
 
 
 0.850
RSp1282
Probable pts system, fructose-specific eIIa/hpr/ei components protein.
 
 
 
 0.848
RSp1422
Putative peptide synthetase protein.
    
 
 0.786
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
    
 
 0.731
uxaA
Putative altronate hydrolase (altronic acid hydratase) protein.
 
     0.599
fruA
Probable pts system, fructose-specific IIbc component (eIIbc-fru) (fructose-permease IIbc component) transmembrane protein.
 
   
 0.554
pstH
Probable phosphocarrier protein hpr (phosphohistidinoprotein-hexose phosphotransferase).
   
 
 0.533
ribAB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.508
RSp1506
Probable transcription regulator protein.
  
   
 0.480
pehC
Polygalacturonase transmembrane protein; Belongs to the glycosyl hydrolase 28 family.
 
     0.477
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.