STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1617Putative cog1475 transcription regulator transcription regulator protein. (209 aa)    
Predicted Functional Partners:
RSp1619
Probable phosphoadenosine phosphosulfate sulfotransferase protein.
 
 
 0.988
RSp1618
Hypothetical protein; Miscellaneous; unknown.
       0.773
RSc2389
Putative partition-related protein.
  
 
 0.511
parA3
Putative partition protein.
  
 
 0.511
parA2
Putative chromosome partitioning protein para.
  
 
 0.511
parA
Probable partition protein.
  
 
 0.511
RSp1620
Putative surface-exposed adhesin protein.
       0.507
gidB
Probable methyltransferase gidb (glucose inhibited divisionprotein b); Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.472
RSc1111
Hypothetical membrane transmembrane protein.
  
     0.467
RSc2109
Probable transmembrane protein.
  
     0.429
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.