STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylFProbable d-xylose-binding periplasmic abc transporter protein. (339 aa)    
Predicted Functional Partners:
xylH
Probable xylose transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
xylG
Probable d-xylose atp-binding abc transporter protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.992
araH
Probable l-arabinose transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
   
 0.905
RSc1015
Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
   
 0.798
araG
Probable l-arabinose atp-binding abc transporter protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
  
 0.790
RSc1243
Probable sugar transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.786
RSc1016
Probable ribose abc transporter, atp-binding abc transporter protein.
  
 0.774
RSc1242
Probable sugar atp-binding abc transporter protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.
  
 0.754
RSc0807
Putative tautomerase (4-oxalocrotonate tautomerase) protein.
      
 0.635
RSp1151
Putative 4-oxalocrotonate tautomerase homolog protein.
      
 0.635
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.