STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylGProbable d-xylose atp-binding abc transporter protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (514 aa)    
Predicted Functional Partners:
xylH
Probable xylose transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
xylF
Probable d-xylose-binding periplasmic abc transporter protein.
 
 0.993
araH
Probable l-arabinose transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.931
RSc1243
Probable sugar transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.927
RSc1015
Probable ribose abc transporter, permease abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.919
mocB
Putative rhizopine-binding precursor signal peptide protein.
 
 
 0.888
RSc1017
Probable ribose abc transporter, periplasmic ribose-binding abc transporter protein.
 
 
 0.887
araF
Probable l-arabinose-binding periplasmic (pbp) abc transporter protein; Belongs to the bacterial solute-binding protein 2 family.
  
 
 0.574
RSp1636
Putative nad-dependent epimerase/dehydratase; oxidoreductase protein.
      0.568
RSp1026
Probable signal peptide protein.
  
 
 0.561
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.