STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1637Probable transcription regulator transcription regulator protein. (355 aa)    
Predicted Functional Partners:
fruB
Probable multiphosphoryl transfer protein mtp.
 
 
 
 0.853
RSp1282
Probable pts system, fructose-specific eIIa/hpr/ei components protein.
 
 
 
 0.845
RSp1638
Putative permeases of the drug/metabolite transporter (dmt) superfamily transmembrane protein.
      0.799
RSp1422
Putative peptide synthetase protein.
    
 
 0.786
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
    
 
 0.731
pstH
Probable phosphocarrier protein hpr (phosphohistidinoprotein-hexose phosphotransferase).
   
 
 0.533
ribAB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.508
scrK
Probable fructokinase protein.
 
  
 0.505
fruA
Probable pts system, fructose-specific IIbc component (eIIbc-fru) (fructose-permease IIbc component) transmembrane protein.
     
 0.493
zwf
Probable glucose-6-phosphate 1-dehydrogenase oxidoreductase protein; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 
 0.478
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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