STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp1637Probable transcription regulator transcription regulator protein. (355 aa)    
Predicted Functional Partners:
fruB
Probable multiphosphoryl transfer protein mtp.
 
 
 
 0.916
RSp1282
Probable pts system, fructose-specific eIIa/hpr/ei components protein.
 
 
 
 0.892
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
    
 
 0.850
RSp1422
Putative peptide synthetase protein.
    
 
 0.801
RSp1638
Putative permeases of the drug/metabolite transporter (dmt) superfamily transmembrane protein.
      0.799
scrK
Probable fructokinase protein.
 
  
 0.503
fruA
Probable pts system, fructose-specific IIbc component (eIIbc-fru) (fructose-permease IIbc component) transmembrane protein.
     
 0.497
zwf
Probable glucose-6-phosphate 1-dehydrogenase oxidoreductase protein; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 
 0.461
pstH
Probable phosphocarrier protein hpr (phosphohistidinoprotein-hexose phosphotransferase).
   
 
 0.443
rbsK
Putative ribokinase protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.435
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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