STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp1647Putative sam (and some other nucleotide) binding protein. (466 aa)    
Predicted Functional Partners:
cheB
Probable chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
  
 0.966
cheA
Probable chemotaxis sensor histidine kinase transcription regulator protein.
 
  
 0.942
hrcN
Hrp conserved protein hrcn.
 
 
 0.933
fliI
Probable flagellum-specific atp synthase protein.
 
 
 0.925
RSc0672
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
  
 0.907
fliG
Probable flagellar motor switch protein flig.
 
 
 0.892
fliN
Probable flagellar motor switch protein flin.
 
 
 0.887
RSp0598
Putative response regulator transcription regulator protein.
  
  
 0.872
cheW
Probable chemotaxis protein chew.
 
  
 0.864
RSp1099
Putative methyl-accepting chemotaxis transducer transmembrane protein.
 
 
 0.844
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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