Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xylFXylose solute binding protein; P46 antigen-like from M. hyorhinis; COG4213; expression validated by proteogenomic mapping: 76 unique peptides covering 67.8% of sequence. (538 aa)    
Predicted Functional Partners:
xylG
Xylose ABC transporter ATB-binding protein; COG1129; expression validated by proteogenomic mapping: 32 unique peptides covering 50.5% of sequence.
 
 0.995
xylH
Xylose ABC transporter permease protein; COG1172; expression validated by proteogenomic mapping: 6 unique peptides covering 8.6% of sequence; Belongs to the binding-protein-dependent transport system permease family.
  
 0.964
MMOB0120
Hypothetical protein; Expression not validated.
       0.709
Your Current Organism:
Mycoplasma mobile
NCBI taxonomy Id: 267748
Other names: M. mobile 163K, Mycoplasma mobile 163K, Mycoplasma mobile str. 163K, Mycoplasma mobile strain 163K
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